3D cameras and deep learning

SWBio DTP (BBSRC funded): Harnessing 3D cameras and deep learning for on-the-fly automated body condition and mobility analysis to improve cattle welfare.

Introduction

We are pleased to announce the opportunity to apply for this project as part of the South West Biosciences Doctoral Training Partnership (SWBio DTP) funded by the Biotechnology and Biological Sciences Research Council (BBSRC). This opportunity is fully funded and full time. 

The SWBio DTP offers projects in world-class bioscience. This studentship encompasses the area of bioscience for sustainable agriculture and food.

The closing date for applications is midnight on Monday 7 December 2020.

Studentship details

This project is a standard DTP studentship with an associate partner where you will be required to spend time with each of the partners, which are University of the West of England (UWE Bristol) and the University of Bristol.

Project description

A growing world population and climate change are stressing food availability. High animal welfare and health practices are more important than ever to satisfy societal demands for the livestock sector. The use of precision monitoring instrumentation for dairy cattle is key to optimising production while maintaining animal health.

In this PhD project, 3D video technology with the latest Intel cameras will be used to unobtrusively provide stress-free monitoring of incremental changes in individual cow mobility and body condition with the aim of understanding behavioural cues preceding observed lameness to improve cow health, welfare and productivity and hence increase the climate and environmental sustainability of milk production. These traits are currently measured by manual visual assessment, requiring high skill levels and training, but are nevertheless open to the subjectivity of individuals and rarely capture the longitudinally detail needed for novel behaviour research. This will realise a system that can be transplanted into farms without extensive instrumentation, allowing farmers and others in the value chain such as vets, nutritionists and livestock advisers to make use of much more precise, consistent and frequent measurements, creating greater opportunities to improve cow performance and welfare.

The studentship would suit either a mathematical or computational student interested in sustainable food production, or someone with veterinary or biosciences expertise who wishes to build up artificial intelligence skills – in either case a tailored training package will be developed to suit. The student will learn the key facets of animal welfare assessment, and use this and cutting edge AI to build and apply the system across the studentship timeline so we can develop a better understanding of lameness.

The student will be based 50%/50% at two leading, geographically close institutes – Bristol Robotics Laboratory at the University of West of England, and Bristol Veterinary School & Visual Information Laboratory at the University of Bristol, and will benefit from a broad cross-disciplinary supervision team, led by Prof Melvyn Smith (Machine Vision) and Prof Andrew Dowsey (One Health Data Science), who have published state-of-theart work in this area that will be built upon.

Data collection and validation will harness the Bristol Veterinary School’s John Oldacre Centre for Sustainability and Welfare in Dairy Production, a new research centre based at our Wyndhurst dairy farm, which will include blanket 24/7 video coverage of all our 185 cows linked to data on production, emissions and veterinary assessments.

Supervisory team

  • Lead supervisors: Prof Andrew Dowsey (University of Bristol), Prof Melvyn Smith (UWE Bristol)
  • Dr Siobhan Mullan (University of Bristol)
  • Dr Mark Hansen (UWE Bristol)
  • Dr Tilo Burghardt (University of Bristol)
  • Dr Bo Li (UWE Bristol)

Collaborators

  • Mr Duncan Forbes (Head of Dairy, Agri-EPI Centre)

Host institutions

  • University of Bristol and UWE Bristol

Eligibility

Please view the eligiblity and stipend details on the SWBio DTP website.

How to apply

Please submit applications for this project through the University of Bristol's SWBio DTP page.

View further information about the Southwest Biosciences Doctoral Training Partnership.